STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110085350Uncharacterized protein LOC110085350 isoform X1. (187 aa)    
Predicted Functional Partners:
ERLEC1
Endoplasmic reticulum lectin 1.
   
 0.676
OS9
OS9 endoplasmic reticulum lectin.
   
 0.676
DERL3
Uncharacterized LOC110081966.
   
 0.615
DERL1
Derlin-1.
   
 0.615
DERL2
Derlin-2/3.
   
 0.615
RNASEL
2-5A-dependent ribonuclease.
    
 0.525
SYVN1
E3 ubiquitin-protein ligase synoviolin isoform X1.
    
 0.518
LOC110086607
RING finger protein 145-like isoform X1.
    
 0.518
CHFR
E3 ubiquitin-protein ligase CHFR.
    
 0.518
RNF139
E3 ubiquitin-protein ligase RNF139.
    
 0.518
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.