STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARVCFArmadillo repeat protein deleted in velo-cardio-facial syndrome. (1029 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
    
 0.879
JUP
Junction plakoglobin isoform X1.
   
 0.830
CDH5
Cadherin 5, type 2, VE-cadherin.
    
 0.807
CDH17
Cadherin 17, LI cadherin.
    
 0.737
LOC110076338
B-cadherin-like.
    
 0.719
CDH1
Cadherin 1.
    
 0.719
ZBTB33
Zinc finger and BTB domain-containing protein 33.
    
 
 0.704
CTNNA1
Catenin alpha-1.
   
 0.659
LOC110091167
Catenin alpha-2-like.
   
 0.659
ENSPVIP00000007174
annotation not available
   
 0.659
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.