STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARVCFArmadillo repeat protein deleted in velo-cardio-facial syndrome. (1029 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
   
 0.968
ZBTB33
Zinc finger and BTB domain-containing protein 33.
    
 
 0.907
CDH5
Cadherin 5, type 2, VE-cadherin.
    
 0.899
CDH11
Cadherin 11, type 2, OB-cadherin.
    
 0.888
JUP
Junction plakoglobin isoform X1.
   
 0.883
LOC110076338
B-cadherin-like.
   
 0.851
CDH1
Cadherin 1.
   
 0.851
LOC110089335
Cadherin 8, type 2.
    
 0.839
LOC110088425
Cadherin-8.
    
 0.839
ANGPTL4
Angiopoietin like 4.
     
  0.778
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.