Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110086607RING finger protein 145-like isoform X1. (799 aa)    
Predicted Functional Partners:
MARCHF6
E3 ubiquitin-protein ligase MARCH6.
    
 
 0.685
ERLEC1
Endoplasmic reticulum lectin 1.
   
 0.665
OS9
OS9 endoplasmic reticulum lectin.
   
 0.665
DERL1
Derlin-1.
    
 0.659
HMGCR
3-hydroxy-3-methylglutaryl-coenzyme A reductase-like.
   
 
 0.651
DERL3
Uncharacterized LOC110081966.
    
 0.644
DERL2
Derlin-2/3.
    
 0.644
COPS5
COP9 signalosome complex subunit 5.
    
 
 0.623
NPEPL1
Probable aminopeptidase NPEPL1 isoform X1.
      
 0.622
UBE2G2
Ubiquitin-conjugating enzyme E2 G2.
    
 
 0.616
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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