Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBPMS2RNA binding protein, mRNA processing factor 2. (271 aa)    
Predicted Functional Partners:
RBPMS
RNA-binding protein with multiple splicing isoform X1.
   
   0.979
RBFOX2
RNA binding protein fox-1 homolog 2 isoform X1.
   
 0.908
ESRP1
Epithelial splicing regulatory protein 1 isoform X1.
    
 0.904
RBFOX1
RNA binding protein fox-1 homolog 1 isoform X1.
   
 0.732
PPP2R2C
Protein phosphatase 2, regulatory subunit B, gamma isoform X1.
    
 0.706
ESRP2
Epithelial splicing regulatory protein 2 isoform X1.
    
 0.702
SYNM
Desmuslin.
    
 0.701
LMOD1
Leiomodin-1 isoform X1.
     
 0.662
PDLIM3
PDZ and LIM domain 3.
    
 
 0.610
TOMM34
Mitochondrial import receptor subunit TOM34.
    
 
 0.573
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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