STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEIL1Endonuclease VIII-like 1. (425 aa)    
Predicted Functional Partners:
POLB
DNA polymerase beta.
   
 0.883
OGG1
8-oxoguanine DNA glycosylase.
     
 0.840
PNKP
Polynucleotide kinase 3'-phosphatase.
     
 0.836
XRCC1
DNA repair protein XRCC1 isoform X1.
    
 0.832
POLL
DNA polymerase lambda isoform X1.
   
 0.754
REC114
Meiotic recombination protein REC114.
     
 0.713
NEIL3
Nei like DNA glycosylase 3.
      
 0.679
NTHL1
Endonuclease III-like protein 1.
      
 0.679
WRN
Werner syndrome ATP-dependent helicase isoform X1.
      
 0.679
LIG3
DNA ligase 3.
    
 0.666
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.