Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRCC1Leucine-rich repeat and coiled-coil domain-containing protein 1. (292 aa)    
Predicted Functional Partners:
SKA3
Spindle and kinetochore-associated protein 3.
    
 
 0.710
WDHD1
WD repeat and HMG-box DNA-binding protein 1.
    
 
 0.699
SKA2
Spindle and kinetochore-associated protein 2.
      
 0.695
CCDC61
Coiled-coil domain-containing protein 61 isoform X1.
      
 0.692
DSN1
Kinetochore-associated protein DSN1 homolog.
    
 0.686
CENPI
Centromere protein I.
    
 
 0.679
CENPN
Centromere protein N isoform X1.
      
 0.673
CLASP2
Cytoplasmic linker associated protein 2.
      
 0.671
SKA1
Spindle and kinetochore-associated protein 1 isoform X1.
      
 0.667
CEP72
Centrosomal protein of 72 kDa.
      
 0.652
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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