STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C22orf39UPF0545 protein C22orf39 homolog. (106 aa)    
Predicted Functional Partners:
FBXO16
F-box only protein 16 isoform X1.
    
 
 0.573
GSC2
Homeobox protein goosecoid-like.
    
 
 0.532
GNB1L
Guanine nucleotide-binding protein subunit beta-like protein 1.
    
 0.496
SUPT20H
Transcription factor SPT20 homolog isoform X1.
    
 0.491
TANGO2
Transport and Golgi organization protein 2 homolog.
      
 0.482
NADK
NAD kinase isoform X1.
     
 0.481
MFAP3L
Microfibrillar-associated protein 3-like.
      
 0.479
NUDT18
8-oxo-dGDP phosphatase NUDT18.
      
 0.479
LOC110082094
Ankyrin repeat and KH domain-containing protein 1-like isoform X1.
    
 
 0.474
MEAK7
TLD domain-containing protein 1.
    
 
 0.468
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.