STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4039S ribosomal protein L40, mitochondrial. (249 aa)    
Predicted Functional Partners:
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.982
ENSPVIP00000021434
annotation not available
   
 
 0.963
GADD45GIP1
Growth arrest and DNA damage-inducible proteins-interacting protein 1.
   
 
 0.962
MRPL13
39S ribosomal protein L13, mitochondrial.
   
 
 0.959
MRPL19
39S ribosomal protein L19, mitochondrial isoform X1.
   
 
 0.959
MRPL18
39S ribosomal protein L18, mitochondrial.
   
   0.958
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 
 0.956
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 
 0.956
MRPS30
39S ribosomal protein S30, mitochondrial.
   
 
 0.950
MRPL42
39S ribosomal protein L42, mitochondrial.
   
 
 0.950
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.