Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRTM1Leucine-rich repeat and transmembrane domain-containing protein 1. (354 aa)    
Predicted Functional Partners:
CORIN
Corin, serine peptidase.
    
 0.611
CLSTN2
Calsyntenin 2.
      
 0.569
TMEM220
Transmembrane protein 220.
      
 0.465
ARHGAP28
Rho GTPase-activating protein 18/28/40.
   
  
 0.456
BHLHE23
Basic helix-loop-helix family member e23.
      
 0.452
KIAA0586
Protein TALPID3 isoform X1.
    
 0.444
ACTR8
Actin-related protein 8.
    
 
 0.424
CDK15
Cyclin-dependent kinase 15 isoform X1.
    
 
 0.407
GNG13
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.
      
 0.400
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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