STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX60Probable ATP-dependent RNA helicase DDX60 isoform X1. (1787 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.929
TTC37
Tetratricopeptide repeat protein 37.
   
 0.854
EXOSC10
Exosome component 10.
   
 0.845
EXOSC1
Exosome complex component CSL4.
   
 0.828
EXOSC9
Exosome complex component RRP45 isoform X1.
   
 0.827
EXOSC7
Exosome complex component RRP42.
   
 0.827
EXOSC2
Exosome complex component RRP4.
   
 0.823
C1D
Nuclear nucleic acid-binding protein C1D.
   
 0.812
EXOSC3
Exosome complex component RRP40.
   
 0.809
ZFC3H1
Zinc finger C3H1 domain-containing protein isoform X1.
    
 0.778
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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