Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SULF1Extracellular sulfatase Sulf-1. (899 aa)    
Predicted Functional Partners:
ENSPVIP00000008348
annotation not available
 
      0.833
ENSPVIP00000015033
Arylsulfatase B-like.
  
 
 0.549
LOC110075593
Arylsulfatase H-like.
  
 
 0.505
LOC110075583
Arylsulfatase D-like.
  
 
 0.501
ARSB
Arylsulfatase B.
  
 
 0.498
TYR
Tyrosinase.
    
 
 0.487
SCEL
Sciellin isoform X1.
      
 0.424
M6PR
Cation-dependent mannose-6-phosphate receptor.
     
 0.424
SUMF1
Formylglycine-generating enzyme.
  
 0.420
VAMP8
Vesicle-associated membrane protein 8 isoform X1.
     
  0.417
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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