STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN7ALin-7 homolog A, crumbs cell polarity complex component. (222 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.915
APBA1
Amyloid beta A4 precursor protein-binding family A member 1 isoform X1.
   
 0.870
MPP1
MAGUK 55 kDa erythrocyte membrane protein.
    
 0.842
MPP5
MAGUK p55 subfamily member 5.
    
 0.796
MPP6
MAGUK p55 subfamily member 6.
    
 0.738
MPP2
MAGUK p55 subfamily member 2 isoform X1.
    
 0.738
APBA2
Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.
   
 0.721
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3.
    
 
 0.679
APBA3
Amyloid beta precursor protein binding family A member 3.
    
 0.669
CDA
Cytidine deaminase.
    
   0.596
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.