STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF5Myogenic factor 5. (258 aa)    
Predicted Functional Partners:
EP300
Histone acetyltransferase p300 isoform X1.
    
 
 0.814
CREBBP
CREB-binding protein isoform X1.
    
 
 0.759
MEF2D
LOW QUALITY PROTEIN: myocyte-specific enhancer factor 2D.
    
 0.758
ENSPVIP00000007234
annotation not available
    
 0.744
TCF4
Transcription factor 4 isoform X1.
    
 0.744
TCF3
Transcription factor 3.
    
 0.744
TCF12
Transcription factor 12 isoform X1.
    
 0.744
MEF2A
Myocyte-specific enhancer factor 2A isoform X1.
    
 0.742
MEF2C
Myocyte enhancer factor 2C.
    
 0.742
FBXO32
F-box only protein 32 isoform X1.
    
 
 0.661
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.