STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070791Cytoplasmic tRNA 2-thiolation protein 1-like. (352 aa)    
Predicted Functional Partners:
CTU2
Cytoplasmic tRNA 2-thiolation protein 2.
   
 0.966
URM1
Ubiquitin related modifier 1.
    
 0.926
MOCS3
Adenylyltransferase and sulfurtransferase MOCS3.
  
 
 0.874
ELP3
Elongator acetyltransferase complex subunit 3.
   
 
 0.759
ELP5
Elongator complex protein 5.
   
 
 0.722
ELP1
Elongator complex protein 1.
   
 
 0.702
FTSJ3
LOW QUALITY PROTEIN: pre-rRNA processing protein FTSJ3.
   
  
 0.696
ENSPVIP00000005136
annotation not available
   
 0.681
WDR74
Ribosome biogenesis protein NSA1.
   
    0.676
NFS1
Cysteine desulfurase, mitochondrial.
    
 0.670
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.