Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL4-2Lipoma HMGIC fusion partner-like 4 protein. (233 aa)    
Predicted Functional Partners:
TMC2
Transmembrane channel-like protein 2 isoform X1.
   
 0.671
PCDH15
Protocadherin-15 isoform X1.
    
 0.668
CDHR5
LOW QUALITY PROTEIN: cadherin-related family member 5.
    
 0.668
CIB2
Calcium and integrin-binding family member 2 isoform X1.
     
 0.665
CIB3
Calcium and integrin-binding family member 3 isoform X1.
     
 0.556
TMC1
Transmembrane channel like 1.
   
 0.553
TMC3
Transmembrane channel like 3.
   
 0.553
GGT7
Gamma-glutamyltranspeptidase / glutathione hydrolase.
   
   0.540
EWSR1
RNA-binding protein EWS isoform X1.
      
 0.483
GCLC
Glutamate--cysteine ligase catalytic subunit.
      
 0.454
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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