STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCHCR1Coiled-coil alpha-helical rod protein 1. (810 aa)    
Predicted Functional Partners:
IQCC
IQ domain-containing protein C.
    
 
 0.864
CBY2
Chibby family member 2.
    
 
 0.697
FAM187B
Protein FAM187B.
      
 0.696
WASHC3
WASH complex subunit 3 isoform X1.
    
   0.667
TCF19
Transcription factor 19.
      
 0.639
VARS1
Valyl-tRNA synthetase.
      
 0.623
LSM2
U6 snRNA-associated Sm-like protein LSm2.
      
 0.621
ICE2
Little elongation complex subunit 2.
      
 0.618
STAR
Steroidogenic acute regulatory protein, mitochondrial.
    
 
 0.616
C1orf94
Uncharacterized protein C1orf94 homolog isoform X1.
    
   0.616
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.