Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JADE3Protein Jade-3 isoform X1. (819 aa)    
Predicted Functional Partners:
ING4
Inhibitor of growth protein 4 isoform X1.
    
 0.911
KAT8
Histone acetyltransferase MYST1.
    
 0.687
KAT5
Histone acetyltransferase HTATIP.
    
 0.687
LOC110069898
Histone acetyltransferase HTATIP.
    
 0.687
KAT7
Histone acetyltransferase KAT7 isoform X1.
    
 0.687
KAT6B
Lysine acetyltransferase 6B.
    
 0.604
KAT6A
Histone acetyltransferase KAT6A.
    
 0.604
JADE2
E3 ubiquitin-protein ligase Jade-2.
    
 
 0.600
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 
 0.588
PACC1
Transmembrane protein 206.
      
 0.570
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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