Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
PDIK1LSerine/threonine-protein kinase PDIK1L. (341 aa)    
Predicted Functional Partners:
BECN1
Beclin-1.
    
 0.839
PIK3R4
Phosphoinositide-3-kinase, regulatory subunit 4.
    
 0.839
ATG13
Autophagy-related protein 13 isoform X1.
   
 0.834
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
   
 0.830
ATG101
Autophagy-related protein 101.
    
 0.816
CTDSPL2
CTD small phosphatase-like protein 2.
   
 
 0.750
ATG3
Autophagy related 3.
   
 
 0.739
ENSPVIP00000014302
Phosphatidylinositol 3-kinase catalytic subunit type 3-like.
    
 0.736
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.736
ATG2B
Autophagy-related protein 2 homolog B isoform X1.
   
 
 0.734
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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