STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE9Copine-9. (515 aa)    
Predicted Functional Partners:
RNASEH2B
Ribonuclease H2 subunit B isoform X1.
   
 0.664
RNASEH2A
Ribonuclease H2 subunit A.
   
 0.616
SERGEF
Secretion-regulating guanine nucleotide exchange factor.
   
  
 0.566
ZFC3H1
Zinc finger C3H1 domain-containing protein isoform X1.
      
 0.561
ZNF536
Zinc finger protein 536-like.
      
 0.561
TSPAN8
Tetraspanin-8 isoform X1.
      
 0.561
TBC1D15
TBC1 domain family member 15 isoform X1.
      
 0.560
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.