STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGG18-oxoguanine DNA glycosylase. (485 aa)    
Predicted Functional Partners:
NEIL1
Endonuclease VIII-like 1.
     
 0.949
APEX1
DNA-(apurinic or apyrimidinic site) lyase.
   
 0.897
POLH
DNA polymerase eta.
  
 
 0.897
NTHL1
Endonuclease III-like protein 1.
   
 
 0.844
ATPAF1
ATP synthase mitochondrial F1 complex assembly factor 1 isoform X1.
      
 0.813
POLI
DNA polymerase iota isoform X1.
  
 
 0.794
MSH6
DNA mismatch repair protein Msh6 isoform X1.
   
 
 0.767
ENSPVIP00000024186
annotation not available
   
 
 0.767
XRCC1
DNA repair protein XRCC1 isoform X1.
    
 
 0.754
ENSPVIP00000020409
annotation not available
    
 
 0.738
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.