STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR1Cadherin-related family member 1 isoform X1. (863 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
    
 0.588
JUP
Junction plakoglobin isoform X1.
    
 0.588
PCDH15
Protocadherin-15 isoform X1.
   
0.524
CDHR5
LOW QUALITY PROTEIN: cadherin-related family member 5.
   
 0.524
GPR87
G-protein coupled receptor 87 isoform X1.
      
 0.514
USH1C
Harmonin isoform X1.
   
 0.483
LGMN
Legumain.
      
 0.479
C8orf37
Protein C8orf37 homolog isoform X1.
      
 0.454
RPGRIP1
RPGR interacting protein 1.
     
 0.438
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
   
 0.430
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.