Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRIT2Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2. (470 aa)    
Predicted Functional Partners:
CCDC126
Coiled-coil domain-containing protein 126.
      
 0.864
WDR17
WD repeat-containing protein 17 isoform X1.
      
 0.817
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
   
 0.713
FAM169A
Soluble lamin-associated protein of 75 kDa isoform X1.
    
 0.705
MANSC4
MANSC domain-containing protein 4.
      
 0.668
DDX28
Probable ATP-dependent RNA helicase DDX28.
    
 0.633
TTC38
Tetratricopeptide repeat protein 38.
      
 0.604
FAM169B
Protein FAM169B.
    
 0.586
KCNJ14
Potassium inwardly-rectifying channel subfamily J member 14.
     
 0.578
BMS1
Ribosome biogenesis protein BMS1 homolog.
      
 0.531
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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