Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LRIT1Leucine rich repeat, Ig-like and transmembrane domains 1. (631 aa)    
Predicted Functional Partners:
FRMPD1
FERM and PDZ domain-containing protein 1 isoform X1.
      
 0.866
WDR90
WD repeat-containing protein 90-like.
    
  0.771
HOMEZ
Homeobox and leucine zipper protein Homez isoform X1.
    
 0.750
NTNG1
Netrin-G1 isoform X1.
    
 0.723
LRIT2
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
   
 0.713
MANSC4
MANSC domain-containing protein 4.
    
 
 0.702
GPSM2
G-protein signaling modulator 2.
    
 
 0.688
DDX28
Probable ATP-dependent RNA helicase DDX28.
    
 0.660
TONSL
Tonsoku like, DNA repair protein.
    
 0.659
ENSPVIP00000015452
annotation not available
    
 0.656
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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