STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHATCholine O-acetyltransferase. (640 aa)    
Predicted Functional Partners:
SLC18A3
Solute carrier family 18 member A3.
 
 
 
 0.991
ACHE
Acetylcholinesterase isoform X1.
     
 0.967
GPCPD1
Glycerophosphocholine phosphodiesterase GPCPD1 isoform X1.
   
 
 0.920
LOC110071630
Acetylcholinesterase-like.
     
 0.917
PHOSPHO1
Phosphoethanolamine/phosphocholine phosphatase isoform X1.
     
 0.909
CHKB
Choline kinase beta.
   
 
 0.906
CHKA
Choline/ethanolamine kinase.
   
 
 0.906
SCP2
Non-specific lipid-transfer protein.
   
 0.757
LOC110077088
Enoyl-CoA delta isomerase 2, mitochondrial-like.
   
 0.715
ENSPVIP00000030595
annotation not available
   
 0.715
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.