Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRR1KRR1 small subunit processome component homolog isoform X1. (382 aa)    
Predicted Functional Partners:
NOP14
NOP14 nucleolar protein.
   
 0.999
UTP11
Probable U3 small nucleolar RNA-associated protein 11.
   
 0.999
UTP14A
U3 small nucleolar RNA-associated protein 14 homolog A.
   
 0.998
PDCD11
Programmed cell death 11.
   
 0.998
UTP3
U3 small nucleolar RNA-associated protein 3.
   
 0.998
WDR46
U3 small nucleolar RNA-associated protein 7.
   
 0.998
DDX52
Probable ATP-dependent RNA helicase DDX52.
   
 0.998
FCF1
U3 small nucleolar RNA-associated protein 24.
   
 0.997
NOC4L
U3 small nucleolar RNA-associated protein 19.
   
 0.996
EMG1
RRNA small subunit pseudouridine methyltransferase Nep1.
  
 0.996
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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