STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIPTCysteine-rich PDZ-binding protein. (214 aa)    
Predicted Functional Partners:
PHF5A
PHD finger-like domain-containing protein 5A.
   
   0.790
SF3B1
Splicing factor 3B subunit 1 isoform X1.
    
   0.784
RNF113A
RING finger protein 113A isoform X1.
    
   0.784
SF3B2
Splicing factor 3b subunit 2.
    
   0.784
SF3B3
Splicing factor 3B subunit 3.
    
   0.784
LOC110085823
Armadillo repeat-containing protein 7-like isoform X1.
    
 
 0.738
ENSPVIP00000001343
annotation not available
    
 
 0.738
CWC15
Spliceosome-associated protein CWC15 homolog.
   
   0.635
ENSPVIP00000022408
annotation not available
    
   0.632
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
   0.632
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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