Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCFD2Multiple coagulation factor deficiency protein 2. (147 aa)    
Predicted Functional Partners:
LMAN1
Lectin, mannose-binding 1.
   
 0.999
F8
Coagulation factor VIII.
     
 0.830
F5
Coagulation factor V (labile factor).
     
 0.739
SEC24C
Protein transport protein Sec24C isoform X1.
     
 0.698
SEC24A
Protein transport protein Sec24A isoform X1.
     
 0.680
CTSC
Dipeptidyl peptidase 1.
     
 0.667
SEC31A
SEC31 homolog A, COPII coat complex component.
     
 0.649
C3orf18
Uncharacterized protein C3orf18 homolog isoform X1.
      
 0.649
LMAN2L
Lectin, mannose-binding 2-like.
     
 0.635
LMAN2
Vesicular integral-membrane protein VIP36.
     
 0.635
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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