STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110074425Retinol dehydrogenase 16-like. (317 aa)    
Predicted Functional Partners:
CYP26A1
Cytochrome P450 family 26 subfamily A.
    
 0.914
LRAT
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.909
BCO1
Beta,beta-carotene 15,15'-dioxygenase.
     
 0.906
PNPLA4
Patatin-like phospholipase domain-containing protein 4 isoform X1.
     
 0.905
DGAT1
Diacylglycerol O-acyltransferase 1.
   
 
  0.903
CYP27C1
All-trans-retinol 3,4-desaturase.
    
 0.902
LOC110089018
Aldehyde oxidase 2-like.
     
  0.900
ALDH1A3
Aldehyde dehydrogenase family 1 member A3.
     
 0.695
LOC110081706
Retinal dehydrogenase 1-like.
     
 0.694
LOC110081707
Retinal dehydrogenase 1.
     
 0.694
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.