STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBR5E3 ubiquitin-protein ligase UBR5 isoform X1. (2798 aa)    
Predicted Functional Partners:
BUB3
Mitotic checkpoint protein BUB3 isoform X1.
    
 
 0.934
UBE2L3
Ubiquitin-conjugating enzyme E2 L3.
    
 
 0.930
BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
    
   0.927
TRIP12
E3 ubiquitin-protein ligase TRIP12.
   
  
 0.920
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
   0.910
PAIP2
Polyadenylate-binding protein-interacting protein 2 isoform X1.
    
 
 0.889
TP53
Cellular tumor antigen p53.
    
 
 0.869
ZUP1
Zinc finger with UFM1-specific peptidase domain protein isoform X1.
    
 
 0.867
MCRS1
Microspherule protein 1 isoform X1.
    
   0.863
UBC
Polyubiquitin-C.
    
 
 0.862
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.