STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000008519annotation not available (67 aa)    
Predicted Functional Partners:
ARCN1
Coatomer subunit delta.
   
 0.874
COPE
Coatomer subunit epsilon.
   
 0.871
COPB1
Coatomer subunit beta isoform X1.
   
 0.863
COPB2
Coatomer subunit beta.
   
 0.863
COPA
Coatomer protein complex subunit alpha.
   
 0.861
ENSPVIP00000000385
annotation not available
   
 0.718
COPG1
Coatomer subunit gamma-1 isoform X1.
   
 0.718
COPG2
Coatomer protein complex subunit gamma 2.
   
 0.718
NBAS
Neuroblastoma-amplified sequence.
     
 0.608
YKT6
Synaptobrevin homolog YKT6.
   
 0.598
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.