STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110074432TBC1 domain family member 15-like isoform X1. (515 aa)    
Predicted Functional Partners:
RAB7A
Ras-related protein Rab-7A.
    
 0.706
OPTN
Optineurin.
   
 0.689
RAB7B
Ras-related protein Rab-7B.
   
 0.608
BNIP3
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3.
      
 0.557
ARMC5
Armadillo repeat-containing protein 5.
   
 0.530
RAB9B
Ras-related protein Rab-9B.
   
 0.530
RAB9A
Ras-related protein Rab-9A.
   
 0.530
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.498
SQSTM1
Sequestosome-1 isoform X1.
      
 0.493
SERGEF
Secretion-regulating guanine nucleotide exchange factor.
   
  
 0.493
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.