STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMUG1Single-strand selective monofunctional uracil DNA glycosylase. (253 aa)    
Predicted Functional Partners:
ADAT3
Probable inactive tRNA-specific adenosine deaminase-like protein 3.
   
 0.870
TDG
G/T mismatch-specific thymine DNA glycosylase.
   
  
 0.869
UNG
Uracil-DNA glycosylase.
  
 
 0.869
ENSPVIP00000016386
annotation not available
    
   0.832
ENSPVIP00000016387
annotation not available
    
   0.832
MBD4
Methyl-CpG-binding domain protein 4 isoform X1.
      
 0.808
APEX1
DNA-(apurinic or apyrimidinic site) lyase.
   
 
 0.767
NEIL1
Endonuclease VIII-like 1.
      
 0.697
ENSPVIP00000001738
annotation not available
  
 
 0.680
TYMS
Thymidylate synthase.
  
 
 0.680
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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