Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXC6Homeobox protein Hox-C6 isoform X1. (236 aa)    
Predicted Functional Partners:
HOXC9
Homeobox protein HoxB/C/D9.
   
 
 0.973
HOXC5
Homeobox C5.
   
 
 0.862
HOXC4
Homeobox protein HoxA/B/C/D4.
   
 
 0.859
HOXB5
Homeobox protein HoxA/B/C5.
   
   0.806
HOXA6
Homeobox protein HoxA/B/C6.
   
   0.796
HOXB7
Homeobox protein HoxA/B7.
   
 
 0.768
HOXD4
Homeobox D4.
   
 
 0.688
HOXB6
Homeobox protein Hox-B6 isoform X1.
   
   0.665
HOXB4
Homeobox protein HoxA/B/C/D4.
   
 
 0.632
HOXA7
LOW QUALITY PROTEIN: homeobox protein Hox-A7.
   
 
 0.594
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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