Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXC8Homeobox protein HoxB/C/D8. (241 aa)    
Predicted Functional Partners:
HOXB6
Homeobox protein Hox-B6 isoform X1.
   
 
 0.618
MEIS1
Homeobox protein Meis1 isoform X1.
   
 0.571
ILF3
Interleukin enhancer-binding factor 3 isoform X1.
     
  0.571
HOXC9
Homeobox protein HoxB/C/D9.
   
 
 0.533
HOXB7
Homeobox protein HoxA/B7.
   
 
 0.477
PBX2
Pre-B-cell leukemia transcription factor 2 isoform X1.
    
 0.457
PBX1
Pre-B-cell leukemia transcription factor 1 isoform X1.
    
 0.457
ENSPVIP00000019339
annotation not available
    
 0.457
PBX3
Pre-B-cell leukemia transcription factor 3 isoform X1.
    
 0.457
PBX4
Pre-B-cell leukemia transcription factor 3-like isoform X1.
    
 0.457
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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