Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox protein HoxA/C/D13. (306 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box N1.
    
 
 0.752
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.633
RNF41
E3 ubiquitin-protein ligase NRDP1.
      
 0.617
ENSPVIP00000008617
annotation not available
      
 0.520
FOXN4
Forkhead box protein N4.
    
 
 0.484
TYR
Tyrosinase.
      
 0.483
DLX3
Homeobox protein DLX-3.
    
 
 0.457
RAB27B
Ras-related protein Rab-27B.
      
 0.447
RAB27A
Ras-related protein Rab-27A.
      
 0.447
LHX9
LIM/homeobox protein Lhx9 isoform X1.
    
 
 0.440
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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