Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATF7Cyclic AMP-dependent transcription factor ATF-7. (522 aa)    
Predicted Functional Partners:
JUN
Transcription factor AP-1.
   
 0.952
MAPK9
Mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase).
   
 0.887
JUNB
Transcription factor jun-B.
   
 0.830
JUND
Transcription factor jun-D.
   
 0.830
FOS
Proto-oncogene protein c-fos.
    
 0.828
CREBBP
CREB-binding protein isoform X1.
   
 0.822
JDP2
Jun dimerization protein 2 isoform X1.
    
 
 0.813
MAPK11
Mitogen-activated protein kinase 11.
    
 0.785
MAPK14
Mitogen-activated protein kinase 14 isoform X1.
    
 0.785
MAPK13
Mitogen-activated protein kinase 13.
    
 0.781
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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