Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMG5Protein SMG5. (1048 aa)    
Predicted Functional Partners:
UPF1
Regulator of nonsense transcripts 1 isoform X1.
   
 0.999
SMG7
LOW QUALITY PROTEIN: protein SMG7.
   
 0.989
SMG6
LOW QUALITY PROTEIN: telomerase-binding protein EST1A.
   
 0.985
UPF2
Regulator of nonsense transcripts 2 isoform X1.
   
 0.961
SMG9
Protein SMG9 isoform X1.
   
 
 0.953
SMG8
Protein SMG8.
     
 0.950
ZGRF1
Zinc finger GRF-type containing 1.
   
 0.931
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
   
 0.919
UPF3A
Regulator of nonsense transcripts 3A isoform X1.
   
 0.919
ENSPVIP00000029951
annotation not available
   
 0.919
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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