Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTBK1Tau-tubulin kinase 1. (1332 aa)    
Predicted Functional Partners:
CEP164
Centrosomal protein of 164 kDa.
    
 0.760
LTV1
Protein LTV1 homolog.
    
 0.722
RIOK2
Serine/threonine-protein kinase RIO2.
   
 0.713
BYSL
Essential nuclear protein 1.
    
 0.707
TSR1
Pre-rRNA-processing protein TSR1 homolog.
    
 0.703
NUDCD2
NudC domain-containing protein 2.
    
 
 0.700
NOB1
RNA-binding protein NOB1.
    
 0.670
RPS3
Small subunit ribosomal protein S3e.
    
 0.628
C20orf194
Chromosome unknown C20orf194 homolog.
      
 0.602
CEP89
Centrosomal protein 89.
     
 0.596
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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