Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSR2Translocon-associated protein subunit beta. (183 aa)    
Predicted Functional Partners:
SSR3
Translocon-associated protein subunit gamma.
   
 0.999
SSR1
Translocon-associated protein subunit alpha isoform X1.
   
 0.999
SSR4
Signal sequence receptor subunit 4.
   
 0.998
SEC61B
Protein transport protein SEC61 subunit beta.
   
 0.986
SEC61A1
Protein transport protein SEC61 subunit alpha.
   
 0.865
KRTCAP2
Keratinocyte-associated protein 2.
   
 
 0.858
SEC61G
Protein transport protein SEC61 subunit gamma and related proteins.
   
 0.858
DAD1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1.
   
 
 0.854
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit.
   
 0.852
FKBP11
Peptidyl-prolyl cis-trans isomerase FKBP11.
   
 
 0.851
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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