STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAASAladin. (539 aa)    
Predicted Functional Partners:
NDC1
Nucleoporin NDC1 isoform X1.
   
 0.996
NUP155
Nuclear pore complex protein Nup155.
   
 0.995
NUP85
Nuclear pore complex protein Nup85.
   
 0.994
NUP188
Nuclear pore complex protein Nup188.
   
 0.994
NUP93
Nuclear pore complex protein Nup93 isoform X1.
   
 0.993
SEH1L
Nucleoporin SEH1 isoform X1.
    
 0.993
NUP88
Nuclear pore complex protein Nup88.
   
 0.993
NUP43
Nuclear pore complex protein Nup43.
   
 0.990
NUP35
Nuclear pore complex protein Nup53.
   
 0.990
NUP42
Nucleoporin 42.
    
 0.984
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.