STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDRVitamin D3 receptor. (439 aa)    
Predicted Functional Partners:
FGF23
Fibroblast growth factor 23.
   
 
 0.751
PTH
Parathyroid hormone.
      
 0.718
GC
Vitamin D-binding protein.
   
  
 0.715
UBE2I
Ubiquitin-conjugating enzyme E2 I.
    
 0.678
PIAS4
Protein inhibitor of activated STAT 4.
    
  0.649
MED1
Mediator of RNA polymerase II transcription subunit 1.
    
 0.647
RXRB-2
Retinoic acid receptor RXR-beta.
   
 0.633
RXRB
Retinoid X receptor beta.
   
 0.633
RXRA
Retinoic acid receptor RXR-alpha isoform X1.
   
 0.633
RXRG
Retinoic acid receptor RXR-gamma isoform X1.
   
 0.633
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.