STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070870Major histocompatibility complex class I-related gene protein-like. (357 aa)    
Predicted Functional Partners:
CD8A
T-cell surface glycoprotein CD8 alpha chain isoform X1.
    
 0.970
B2M
Beta-2-microglobulin.
   
 0.961
PDIA3
Protein disulfide-isomerase A3.
    
  0.816
LOC110076170
Calreticulin-like.
    
 0.805
CALR
Calreticulin.
    
 0.805
RPA2
Replication protein A 32 kDa subunit.
   
 0.782
CALR3
Calreticulin-3 isoform X1.
    
 0.779
TAPBP
TAP binding protein (tapasin).
   
 0.571
STN1
CST complex subunit STN1.
   
 0.523
SASS6
Spindle assembly abnormal protein 6 homolog isoform X1.
   
 0.523
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.