Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110080760Cullin-9-like. (2172 aa)    
Predicted Functional Partners:
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.973
TP53
Cellular tumor antigen p53.
    
 0.869
NEDD8
Ubiquitin-like protein Nedd8.
   
 0.848
UBE2L3
Ubiquitin-conjugating enzyme E2 L3.
    
 0.816
APEX2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
    
   0.617
LOC110071729
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.580
UBC
Polyubiquitin-C.
    
 0.557
ANAPC10
Anaphase-promoting complex subunit 10 isoform X1.
      
 0.546
RNF7
RING-box protein 2 isoform X1.
    
 0.531
RPS27A
Ribosomal protein S27a.
    
  0.517
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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