STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM106CTransmembrane protein 106C isoform X1. (262 aa)    
Predicted Functional Partners:
TMEM117
Transmembrane protein 117 isoform X1.
      
 0.694
MARCHF4
E3 ubiquitin-protein ligase MARCH4/9/11.
      
 0.693
TM4SF19
Transmembrane 4 L6 family member 19.
     
 0.634
TMEM106B
Transmembrane protein 106B.
    
   0.616
C12orf4
Protein C12orf4 homolog.
      
 0.565
TMCO3
Transmembrane and coiled-coil domain-containing protein 3.
      
 0.565
UBE2T
Ubiquitin-conjugating enzyme E2 T.
   
  
 0.452
RPAP3
RNA polymerase II-associated protein 3 isoform X1.
    
 
 0.444
CCDC34
Coiled-coil domain containing 34.
    
 0.441
RHBDD2
Rhomboid domain-containing protein 2.
      
 0.432
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.