GPR135 protein (Pogona vitticeps) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GPR135

G protein-coupled receptor 135. (446 aa)

Predicted Functional Partners:

NPFF

0.734

QRFP

0.590

GNG11

0.555

RCVRN

0.547

ARR3

0.530

ARRB2

0.530

ARRB1

0.530

SAG

0.530

GRK7

0.523

RANBP1

0.470

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARR3	GNG11	ENSPVIP00000007961	ENSPVIP00000017364	Arrestin 3.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	0.517
ARR3	GPR135	ENSPVIP00000007961	ENSPVIP00000008676	Arrestin 3.	G protein-coupled receptor 135.	0.530
ARR3	GRK7	ENSPVIP00000007961	ENSPVIP00000007682	Arrestin 3.	Rhodopsin kinase.	0.485
ARR3	RCVRN	ENSPVIP00000007961	ENSPVIP00000012074	Arrestin 3.	Recoverin.	0.499
ARRB1	ARRB2	ENSPVIP00000027590	ENSPVIP00000021881	Arrestin beta 1.	Arrestin beta 2.	0.902
ARRB1	GNG11	ENSPVIP00000027590	ENSPVIP00000017364	Arrestin beta 1.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	0.517
ARRB1	GPR135	ENSPVIP00000027590	ENSPVIP00000008676	Arrestin beta 1.	G protein-coupled receptor 135.	0.530
ARRB1	GRK7	ENSPVIP00000027590	ENSPVIP00000007682	Arrestin beta 1.	Rhodopsin kinase.	0.892
ARRB1	RCVRN	ENSPVIP00000027590	ENSPVIP00000012074	Arrestin beta 1.	Recoverin.	0.499
ARRB2	ARRB1	ENSPVIP00000021881	ENSPVIP00000027590	Arrestin beta 2.	Arrestin beta 1.	0.902
ARRB2	GNG11	ENSPVIP00000021881	ENSPVIP00000017364	Arrestin beta 2.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	0.517
ARRB2	GPR135	ENSPVIP00000021881	ENSPVIP00000008676	Arrestin beta 2.	G protein-coupled receptor 135.	0.530
ARRB2	GRK7	ENSPVIP00000021881	ENSPVIP00000007682	Arrestin beta 2.	Rhodopsin kinase.	0.892
ARRB2	RCVRN	ENSPVIP00000021881	ENSPVIP00000012074	Arrestin beta 2.	Recoverin.	0.499
GNG11	ARR3	ENSPVIP00000017364	ENSPVIP00000007961	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	Arrestin 3.	0.517
GNG11	ARRB1	ENSPVIP00000017364	ENSPVIP00000027590	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	Arrestin beta 1.	0.517
GNG11	ARRB2	ENSPVIP00000017364	ENSPVIP00000021881	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	Arrestin beta 2.	0.517
GNG11	GPR135	ENSPVIP00000017364	ENSPVIP00000008676	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	G protein-coupled receptor 135.	0.555
GNG11	GRK7	ENSPVIP00000017364	ENSPVIP00000007682	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	Rhodopsin kinase.	0.758
GNG11	RCVRN	ENSPVIP00000017364	ENSPVIP00000012074	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.	Recoverin.	0.713