STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCN1Chloride channel 1, skeletal muscle. (98 aa)    
Predicted Functional Partners:
ENSPVIP00000000571
annotation not available
 
     0.920
BSND
Barttin (chloride channel Ka/b beta subunit).
   
 
 0.660
ENSPVIP00000013927
Chloride channel protein ClC-Kb-like.
 
     0.603
OSTM1
Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).
   
 0.469
DARS2
Aspartate--tRNA ligase, mitochondrial.
     
 0.426
EIF2B5
Eukaryotic translation initiation factor 2B subunit epsilon.
      
 0.423
CRBN
Protein cereblon isoform X1.
    
 
 0.400
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.