Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRRT3Proline-rich transmembrane protein 3. (1109 aa)    
Predicted Functional Partners:
NEDD8
Ubiquitin-like protein Nedd8.
   
 0.755
RPS27A
Ribosomal protein S27a.
    
 0.664
VSTM2L
V-set and transmembrane domain containing 2 like.
   
  
 0.631
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.593
LOC110072526
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.593
SENP8
Sentrin-specific protease 8.
    
 0.585
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.584
ERCC8
DNA excision repair protein ERCC-8 isoform X1.
   
  
 0.583
POLR3A
DNA-directed RNA polymerase III subunit RPC1.
      
 0.572
ZZEF1
Zinc finger ZZ-type and EF-hand domain-containing protein 1.
      
 0.566
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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