STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH2Cadherin 2, type 1, N-cadherin. (1025 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
   
 0.844
JUP
Junction plakoglobin isoform X1.
   
 0.811
CTNNA1
Catenin alpha-1.
   
 0.769
CDH11
Cadherin 11, type 2, OB-cadherin.
  
0.731
PTPN1
Protein tyrosine phosphatase non-receptor type 1.
    
 0.731
CDH13
Cadherin 13, H-cadherin.
   
 
 
0.721
CDH18
Cadherin-18 isoform X1.
     
 
0.720
CDH7
LOW QUALITY PROTEIN: cadherin-7.
    
 
0.720
CDH9
Cadherin 9, type 2, T1-cadherin.
  
  
 
0.700
CDH6
Cadherin 6, type 2, K-cadherin.
  
  
 
0.694
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.