STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH2Cadherin 2, type 1, N-cadherin. (1025 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
   
 0.773
JUP
Junction plakoglobin isoform X1.
   
 0.733
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
    
 0.637
CTNND1
Catenin (cadherin-associated protein), delta 1.
    
 0.637
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.500
CDH11
Cadherin 11, type 2, OB-cadherin.
  
 
0.497
CDH5
Cadherin 5, type 2, VE-cadherin.
     
0.488
CDH20
Cadherin-20 isoform X1.
  
 
0.483
LOC110091429
Catenin delta-2-like.
    
 0.475
CTNND2
Catenin delta-2.
    
 0.475
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.