STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSFMElongation factor Ts, mitochondrial isoform X1. (329 aa)    
Predicted Functional Partners:
TUFM
Elongation factor Tu, mitochondrial.
  
 0.997
MRRF
Ribosome-recycling factor, mitochondrial isoform X1.
  
 
 0.986
MRPS16
28S ribosomal protein S16, mitochondrial.
  
 0.971
MRPL19
39S ribosomal protein L19, mitochondrial isoform X1.
  
 0.966
PDCD11
Programmed cell death 11.
  
 
 0.964
MRPS9
28S ribosomal protein S9, mitochondrial isoform X1.
  
 0.956
MRPL9
39S ribosomal protein L9, mitochondrial.
   
 0.941
C3orf20
Uncharacterized protein C3orf20 homolog isoform X1.
  
 0.939
LOC110091535
Uncharacterized protein C3orf20-like.
  
 0.939
MRPL12
39S ribosomal protein L12, mitochondrial.
  
 0.937
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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