STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC8BKelch domain-containing protein 8B. (354 aa)    
Predicted Functional Partners:
CCT5
T-complex protein 1 subunit epsilon.
    
   0.859
CCT3
T-complex protein 1 subunit gamma.
    
 
 0.776
CCT7
T-complex protein 1 subunit eta.
    
   0.772
RRP36
Ribosomal RNA processing protein 36 homolog.
      
 0.693
PRR35
Proline rich 35.
      
 0.689
TMEM184B
Transmembrane protein 184B isoform X1.
      
 0.674
SPATA48
Uncharacterized protein C7orf72 homolog.
      
 0.658
TRAPPC6B
Trafficking protein particle complex subunit 6B.
   
  
 0.645
SIPA1L2
Signal-induced proliferation-associated 1-like protein 2 isoform X1.
   
 
 0.644
PEX7
Peroxisomal biogenesis factor 7.
    
   0.639
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.